基于网络药理学和分子对接技术探讨桔梗治疗非小细胞肺癌分子机制
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R285;R734.2

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重庆市科技局面上项目(cstc2020jcyj-msxmX1049);重庆市教委科学技术研究项目(KJQN202102714,KJZD-K202202701);重庆三 峡医药高等专科学校重大项目(XJ2021000301)


Discussion on Molecular Mechanism of Platycodonis Radix in Treating Non-Small Cell Lung Cancer Based on Network Pharmacology and Molecular Docking
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    目的:基于网络药理学和分子对接技术探讨桔梗治疗非小细胞肺癌(NSCLC) 的分子机制。方 法:通过中药系统药理学数据库与分析平台数据库(TCMSP) 获得桔梗的化学成分,通过Pharmmapper 和 Swiss Target Prediction 数据库筛选出桔梗的活性成分靶点,在TTD、DrugBank 数据库中获得与NSCLC 相关的 疾病靶点,通过STRING 数据库进行蛋白-蛋白相互作用(PPI) 分析,采用CytoScape 3.9.1 软件构建PPI 网 络,通过DAVID 数据库对桔梗治疗NSCLC 的作用靶点进行基因本体论(GO) 和京都基因与基因组百科全 书(KEGG) 通路富集分析,通过CytoScape 3.9.1 软件构建“成分-靶点-信号”通路网络,利用分子对接验证 桔梗活性成分与核心靶点的结合能力,通过qPCR 技术对核心靶点的基因相对表达量进行体外实验验证。结 果:筛选得到桔梗7 个潜在活性成分,获得35 个桔梗治疗NSCLC 的靶点,通过PPI 网络分析并根据 度(Degree) 值得到6 个核心靶点。GO 功能富集分析得到94 条与生物过程相关条目、26 条与分子功能相关 条目、47 条与细胞组分相关条目,KEGG 通路富集分析得到癌症通路、表皮生长因子受体(EGFR) 酪氨酸激 酶抑制剂耐药性等42 条通路。分子对接结果表明,花旗松素与前列腺素内过氧化合物酶2(PTGS2)、木犀草 素与P-糖蛋白(ABCB1) 和PTGS2、刺槐素与EGFR 等有较好的对接活性。给药24 h 后,与空白对照组相 比,桔梗提取物低剂量组A549 细胞活性下降(P<0.05),桔梗提取物高剂量组A549 细胞活性低于桔梗提取 物低剂量组(P<0.05)。qPCR 实验结果显示,与空白对照组相比,桔梗提取物低剂量组A549 细胞中 ABCB1、EGFR、PTGS2 mRNA 表达量均降低(P<0.05),桔梗提取物高剂量组A549 细胞中ABCB1、EGFR、 PTGS2 mRNA 表达量均低于桔梗提取物低剂量组(P<0.05)。结论:桔梗的多种活性成分可能通过抑制 ABCB1、EGFR 及PTGS2 等的表达调控癌症通路、EGFR 酪氨酸激酶抑制剂耐药性等信号通路,以治疗 NSCLC。桔梗提取物改善NSCLC 可能存在一定的剂量依赖性。

    Abstract:

    Abstract:Objective:To explore the molecular mechanism of Platycodonis Radix in treating non-small cell lung cancer (NSCLC) based on network pharmacology and molecular docking. Methods:The chemical components of Platycodonis Radix were obtained through Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). The active component targets of Platycodonis Radix were screened through Pharmmapper and Swiss Target Prediction databases. The disease targets associated with NSCLC were obtained from TTD and DrugBank databases. Protein-protein interaction (PPI) analysis was performed based on STRING Database,and PPI network was constructed via Cytoscape3.9.1 Software. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of Platycodonis Radix for NSCLC were performed based on DAVID Database. The "componentstargets- signals" pathway network was constructed by CytoScape 3.9.1 Software,and the binding ability of active components of Platycodonis Radix and core targets was verified by molecular docking. The relative expression levels of core target genes were verified by qPCR in vitro. Results:A total of 7 potential active components of Platycodonis Radix were screened and 35 targets of Platycodonis Radix for NSCLC were obtained. Through the PPI network analysis and according to the Degree value, 6 core targets were obtained. After GO enrichment analysis, 94 items related to biological processes, 26 items related to molecular functions,and 47 items related to cell components were obtained. According to KEGG pathway enrichment analysis, 42 pathways such as pathway in cancer and epidermidine growth factor receptor (EGFR) tyrosine kinase inhibitor resistance in cancer were obtained. The results of molecular docking showed that there were good docking activities between taxolasin and prostaglandin G/H synthase 2 (PTGS2), luteolin with P- glycoprotein (ABCB1) and PTGS2, robinin and EGFR. Twenty- four hours after administration,compared with that in the blank control group,the activity of A549 cells in the low- dose Platycodonis Radix extract group was decreased (P<0.05),and the activity of A549 cells in the high-dose Platycodonis Radix extract group was lower than that in the low-dose Platycodonis Radix extract group (P< 0.05). The results of qPCR showed that compared with that in the blank control group, the mRNA expressions of ABCB1,EGFR and PTGS2 of A549 cells in the low-dose Platycodonis Radix extract group were decreased (P<0.05),and that the mRNA expressions of ABCB1,EGFR and PTGS2 of A549 cells in the high-dose Radix Platycodonis extract group were lower than those in the low-dose Platycodonis Radix extract group (P<0.05). Conclusion: Multiple active components of Platycodonis Radix may inhibit the expressions of ABCB1,EGFR and PTGS2,and then regulate pathway in cancer and EGFR tyrosine kinase inhibitor resistance to treat NSCLC. Platycodonis Radix extract may improve NSCLC in a dose- dependent manner.

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杨策,余婉莹,王文祥,李宁,易东阳,谭小燕.基于网络药理学和分子对接技术探讨桔梗治疗非小细胞肺癌分子机制[J].新中医,2024,56(2):139-146

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  • 在线发布日期: 2024-01-25
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