基于网络药理学和分子对接探讨冠心宁片治疗心力衰竭作用机制
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R541.6

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国家自然科学基金项目(82004178);河南省科技攻关计划(202102310177);河南省中医药科学研究专项课题(2018JDZX073); 广东省中医院中医学术流派传承工作室建设项目(中医二院[2013]233号)


Discussion on Mechanism of Guanxinning Tablets for Heart Failure Based on Network Pharmacology and Molecular Docking
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    摘要:

    目的:采用网络药理学和分子对接的方法,研究中成药冠心宁片治疗心力衰竭(HF) 的作用机制。方法:通过TCMSP 数据库获取冠心宁片所含中药的活性成分和药物成分的潜在靶点;检索Therapeutic Target Database(TTD)、Drugbank 数据库查找与HF 相关的疾病靶点;将药物靶点与疾病靶点经过Uniprot 数据库校正后取交集基因,得到冠心宁片治疗HF 的“成分-靶点-疾病”网络。采用STRING 数据库和DAVID 数据库对交集基因进行PPI 分析、GO 富集分析及KEGG 信号通路富集分析。最后运用AutoDock Vina、ChemBio3D Ultra、PyMOL 等软件对冠心宁片关键活性成分与作用靶点进行分子对接验证。结果:从冠心宁片中共获得33 个药物活性成分,92 个药物靶点,TTD、Drugbank 数据库获得与HF 相关的140 个疾病靶点,最终获得16 个药物与疾病的交集基因。预测冠心宁片中主要成分有丹参酮ⅡA、二氢丹参内酯、4-亚甲丹参新酮、2-异丙基-8-甲基菲-3,4-二酮、隐丹参酮等,作用于NR3C1、PPARG、MMPs、CHRM2、DRD2 等16 个HF 的靶点基因,通过神经活性配体-受体交互作用通路、cGMP-PKG 信号通路、cAMP 信号通路、Ca2+信号通路、肿瘤相关信号通路等发挥治疗作用。分子对接验证了冠心宁片主要成分丹参酮ⅡA 和主要靶点基因NR3C1 的结合活性,发现二者结合度高且稳定。结论:通过网络药理学验证了冠心宁片治疗HF 多成分、多靶点、多通路的特点,其可能是通过调控DNA/RNA 的转录、调节体液-激素相关的信号转导及调节平滑肌收缩来影响心室重塑和调节心肌的收缩力,达到治疗作用。

    Abstract:

    Abstract:Objective:To study the mechanism of Guanxinning tablets,Chinese patent medicines,for heart failure(HF) with the methods of network pharmacology and molecular docking. Methods:The potential targets of the active components and medicine components of Chinese medicine in Guanxinning tablets were obtained by TCMSP database. HF- related disease targets were searched through Therapeutic Target Database(TTD) and Drugbank database; the intersection genes were obtained after rectifying the medicine targets and disease targets by Uniprot database,and the “component-targetdisease” network of Guanxinning tablets for HF was obtained. The PPI analysis,GO enrichment analysis and KEGG signaling pathway enrichment analysis were performed on the intersection genes using STRING database and DAVID database. Finally, the molecular docking verification was performed on the key active components and targets of Guanxinning tabletsby software,such as AutoDock Vina,ChemBio3D Ultra and PyMOL. Results:A total of 33 active components of medicine and 92 medicine targets in Guanxinning tablets were obtained. A total of 140 HF-related disease targets were obtained from TTD and Drugbank database,and 16 medicine- disease intersection genes were finally obtained. It was predicted that the main components in Guanxinning tablets,such as tanshinoneⅡA,dihydrodantolactone,4-methylenedantoinone,2-isopropyl- 8- methyl phenanthroline- 3,4- diketone and cryptotanshinone, act on 16 HF target genes, such as NR3C1, PPARG, MMPs,CHRM2 and DRD2,and exert therapeutic effects through some signaling pathways,including neuroactive ligandreceptor interaction signaling pathway, cGMP- PKG signaling pathway, cAMP signaling pathway, Ca2 + signaling pathway and tumor-associated signaling way. It was verified by molecular docking that the binding activity of tanshinoneⅡA,the main component of Guanxinning tablets, and NR3C1, the main target gene, with high binding degree and stable conception. Conclusion:The characteristics of multi- component,multi- target and multi- pathway of Guanxinning tablets for HF were verified by network pharmacology. It may affect the ventricular remodeling and regulate the myocardial contractility to exert its therapeutic effect by adjusting and controlling the transcription of DNA/RNA and regulating the body fluid-hormonal-related signal transduction and contraction of smooth muscle.

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安宜沛,陈鹏,陈彦,王新陆,王永霞,丁天祥,姚耿圳.基于网络药理学和分子对接探讨冠心宁片治疗心力衰竭作用机制[J].新中医,2022,54(12):9-15

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  • 在线发布日期: 2022-06-22
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